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First released in 2005, Geneious is the world's leading bioinformatics software platform used by over 3,000 universities, institutes and companies in more than 100 countries. Geneious is used by all of the top 20 universities globally (Times Higher Education, 2016) and by sixteen of the 20 largest pharmaceutical companies.
NGS Analysis and Genomics
De novo assembly or reference mapping of Illumina, PacBio or Ion Torrent reads (any length, paired ends, barcodes), using industry leading algorithms including TopHat and Velvet.
Comprehensive analysis of data including genome browser, contig visualization, SNP calling and RNA-Seq expression analysis.
Sequence and Chromatogram Analysis
Trim, assemble and view Sanger sequencing trace files, correct base calls and create consensus sequences. Automatic annotation for gene prediction, motifs, translation and variant calling.
Genotype microsatellite traces with automated ladder fitting and peak calling and generate tables of alleles.

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Alignment and Tree Building
Perform pairwise and multiple alignments of DNA or protein using trusted algorithms including MAFFT and ClustalW. View and edit alignments with real-time translation and highlighting.
Build phylogenetic trees using peer-reviewed algorithms including RAxML and PAUP* and adjust display settings for publication-ready graphics.
Searching, Sharing and Automation
Batch BLAST against NCBI and directly search GenBank. Centralize and collaborate on data with seamlessly integrated shared repositories. Import and export most industry standard file formats.
Setup automated workflows to increase efficiency, control business processes and reduce human error in your research.
What's New in Geneious R10
New features include improved cloning and plasmid viewing, alignment masking, chimera filtering, and better structural variant mapping and long read assembly.

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